B Age at event/cesoring assignment
Variables’ description
Variables | Description | Source |
---|---|---|
a_menslast_overall (some reported years and months) | age at last natural menstrual period | self-reported in expansion baseline, follow-up 1, 4 and 5 surveys |
menarcheage (only in years) | menarche age | self-reported in expansion baseline, follow-up 1, 4 and 5 surveys |
a_SurgicalPM (only in years) | age at surgical time | self-reported in “SURGICAL PROCEDURES” in expansion baseline, follow-up 4 and 5 surveys |
age_dx (exact age) | age at primary cancer diagnosis | calculated based on the date of cancer diagnosed |
age_smn1 (exact age) | age at second malignant neoplasm | calculated based on the date of second cancer diagnose |
age_lastmhr (exact age) | age at last survey that contained menstrual history | calculated based on the date of the most recent questionnaire contained menstrual history |
statusgoli_overall | status in original data set from CCSS | |
a_event | new generated age at event |
Algorithms
Status | Status definition | age at event / censoring | Notes / Modification |
---|---|---|---|
NSPM | ovarian function retained for at least 5 years following cancer diagnosis, but menopause before age 40 |
age at last menstrual period | If the age at last menstrual was too young (e.g. age < 9), the record is deemed incorrect. The subjects will be excluded from analysis. |
Surgical PM | Surgery was the reason cited for the onset of menopause prior age 40 |
age at surgical time | Some “a_menslast_overall” were much earlier than “a_SurgicalPM”, they were reclassified as NSPM or AOF and age at event = “a_menslast_overall” |
age at last menstrual period | “a_menslast_overall” might occur much earlier than “a_SurgicalPM”, in which case, they should be NSPM or AOF. To avoid misclassifying the outcome, they were excluded depending on the cut-off age for outcomes. |
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AOF | Patient’s menstrual period stopped permanently within 5 years of cancer diagnosis |
menarche age or age at last menstrual period or 16, or a_dx + 5 |
If a_menslast_overall is missing, we use age at menarche as the age at event. If both are missing, we use the maximum of (16, age at diagnosis plus 5). |
AOF no menarche |
Patients reported never going through menarche by age 18 |
a_dx + 5 or 16 | There is no menstrual history to assign age at event for this group. The maximum of (age at diagnose + 5, 16) is used. |
Normal | No indications that periods ceased prior to age 40 due to any of the above causes |
age at last survey with menstrual history or 40 |
Extensions of menstrual status beyond age 40 would require further review of the available data. |
age at last menstrual period | When this age was greater than 40. | ||
age at SMN | When SMN prior to age at last menstrual period, the age at event is the age of SMN with a normal ovarian status. |
Changed status (N = 102)
Original status | New status | N = 102 | Reasons |
---|---|---|---|
Surgical PM | SMN prior to surgical time. | ||
Age at surgical time and age at the last were greater than 40, therefore she had normal ovarian status before 40 and was assigned to normal group. | |||
Last menstrual period occurs much earlier than surgery and the time are within 5 years of cancer diagnosis. | |||
Last menstrual period occurs much earlier than surgery at an age after 5 years of cancer diagnosis. | |||
Normal | NSPM occurs before surgical time. | ||
Normal | SMN happens prior to PM | ||
NSPM | age at last menstrual period | When this age was greater than 40. | |
PM (possible) | age at SMN | When SMN prior to age at last menstrual period, the age at event is the age of SMN with a normal ovarian status. |
Original status | Reasons | Numbers |
---|---|---|
Normal | age at event < 9 years old | 1 |
NSPM | age at event < 9 years old | 1 |
Surgical PM | age at event < 9 years old | 17 |
Surgical PM | age at event occurred 3 years prior to age at diagnosis | 3 |
AOF | age at event occurred 3 years prior to age at diagnosis | 5 |
Surgical PM | age at surgical time were missing | 129 |